PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_011217-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family C2H2
Protein Properties Length: 377aa    MW: 41865.9 Da    PI: 8.758
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_011217-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2171.6e-05139162123
                    EEETTTTEEESSHHHHHHHHHH.T CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                    ++Cp+Cg+ F    +L++H+++ H
  NNU_011217-RA 139 FPCPICGEIFHKTQLLEQHQSLkH 162
                    89******************9988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.681139167IPR007087Zinc finger, C2H2
PROSITE patternPS000280141162IPR007087Zinc finger, C2H2
SuperFamilySSF563994.51E-17164376No hitNo description
Gene3DG3DSA:3.90.228.102.1E-5174281IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene3DG3DSA:3.90.228.103.9E-6310376IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MATTTVGSLF NGFIALLLLL LHLGCFVFST TADGPSTKKR KVSPQTSTSP SPPPRLKFNS  60
HKALSSSWSY IKRIFSFNHP NKGVDTHPTT PTLSSARSSQ QLTPEPIVSA PPRKKPTLSK  120
KETDISVDHS SFPLRNDIFP CPICGEIFHK TQLLEQHQSL KHAVSELLDG DSGKNIVQII  180
FKTGWDDRQK NPTIHRILKI HNSPKILARF EEHREYVKLK AARSGVRKRD ERCIADGNEL  240
LRFHCSTFVC DLGQNGNSSL CTQQYCSICG IIRSGFSTKM DGTSTLSSSW RAHMALPDEI  300
EEDFAFMNVK RAMLVCRVVA GRVGIIGRDE DIVDKDELGF DSVVGSGGGV QSRMDEDELF  360
VFNPRAVLPC FVIVYSV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010262797.10.0PREDICTED: uncharacterized protein LOC104601227
TrEMBLB9GIT81e-172B9GIT8_POPTR; Uncharacterized protein
STRINGPOPTR_0001s25700.11e-171(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.11e-105C2H2 family protein